sso 

Specifies an SSO (sequence-specific oligonucleotide) test that was 
          done for this sample. Kit information and scores must be identified 
          to allow for later test reinterpretation.  For NMDP, a corresponding 
          typing-test-names/typing-test-name structure is expected in this 
          same HML document.

        Children:
        ---------
        Allows an OPTIONAL "property" element that may have nested/custom 
        use data related to this typing-method.

        Attributes:
        -----------
        - locus:   locus for multi-locus targets (optional)
        - test-id: Test ID as registered with the test-id-source. 
        - test-id-source: A formal or formal test registry location. For 
                   example, this could be the NCBI GTR (specified as "GTR"), 
                   NMDP for tests registered directly with NMDP (specified as 
                   "NMDP), etc. (required if test-id is used)
        - scores: The results of the SSO test, specified as one string 
                   (ex: "118111100181")

          NMDP allows the following test-id-source values: 
          (Note that this may change in future versions) 
            * gtr:          ID of kit registered with the NCBI Genetic   
                            Testing Registry. (Preferred)
            * nmdp-refid:   ID of kit registered with NMDP. The cardinal 
                            sequence numbers of the registered probes in the 
                            kit will determine the score order.
            * probe-name:   Fully qualified probe name. If this attribute is 
                            used, the scores attribute must contain exactly 
                            one score. (ex: "L0999.K1.V1.A9F-S11")

Complex Type Information

Model

property*
Children: property

Attributes

QName Type Fixed Default Use Inheritable Annotation
locus xs:string optional
scores xs:string required
test-id restriction of xs:string optional
test-id-source xs:string optional

Used By

Element sso

Source 

<xs:complexType name="sso">
  <xs:annotation>
    <xs:documentation>Specifies an SSO (sequence-specific oligonucleotide) test that was done for this sample. Kit information and scores must be identified to allow for later test reinterpretation. For NMDP, a corresponding typing-test-names/typing-test-name structure is expected in this same HML document. Children: --------- Allows an OPTIONAL "property" element that may have nested/custom use data related to this typing-method. Attributes: ----------- - locus: locus for multi-locus targets (optional) - test-id: Test ID as registered with the test-id-source. - test-id-source: A formal or formal test registry location. For example, this could be the NCBI GTR (specified as "GTR"), NMDP for tests registered directly with NMDP (specified as "NMDP), etc. (required if test-id is used) - scores: The results of the SSO test, specified as one string (ex: "118111100181") NMDP allows the following test-id-source values: (Note that this may change in future versions) * gtr: ID of kit registered with the NCBI Genetic Testing Registry. (Preferred) * nmdp-refid: ID of kit registered with NMDP. The cardinal sequence numbers of the registered probes in the kit will determine the score order. * probe-name: Fully qualified probe name. If this attribute is used, the scores attribute must contain exactly one score. (ex: "L0999.K1.V1.A9F-S11")</xs:documentation>
  </xs:annotation>
  <xs:sequence>
    <xs:element name="property" type="hmlns:property" minOccurs="0" maxOccurs="unbounded"/>
  </xs:sequence>
  <xs:attribute name="locus" type="xs:string" use="optional"/>
  <xs:attribute name="test-id" use="optional">
    <xs:simpleType>
      <xs:restriction base="xs:string">
        <xs:minLength value="1"/>
      </xs:restriction>
    </xs:simpleType>
  </xs:attribute>
  <xs:attribute name="test-id-source" type="xs:string" use="optional"/>
  <xs:attribute name="scores" type="xs:string" use="required"/>
</xs:complexType>