Data items in the STRUCT_NCS_DOM_LIM category identify the start and end points of polypeptide chain segments that form all or part of a domain in an ensemble of domains related by noncrystallographic symmetry. Example 1 - based on laboratory records for the collagen-like peptide, HYP-. <PDBx:struct_ncs_dom_limCategory> <PDBx:struct_ncs_dom_lim dom_id="d1" pdbx_component_id="1" pdbx_ens_id="1"> <PDBx:beg_label_alt_id xsi:nil="true" /> <PDBx:beg_label_asym_id>A</PDBx:beg_label_asym_id> <PDBx:beg_label_comp_id>PRO</PDBx:beg_label_comp_id> <PDBx:beg_label_seq_id>1</PDBx:beg_label_seq_id> <PDBx:end_label_alt_id xsi:nil="true" /> <PDBx:end_label_asym_id>A</PDBx:end_label_asym_id> <PDBx:end_label_comp_id>GLY</PDBx:end_label_comp_id> <PDBx:end_label_seq_id>29</PDBx:end_label_seq_id> </PDBx:struct_ncs_dom_lim> <PDBx:struct_ncs_dom_lim dom_id="d1" pdbx_component_id="2" pdbx_ens_id="1"> <PDBx:beg_label_alt_id xsi:nil="true" /> <PDBx:beg_label_asym_id>B</PDBx:beg_label_asym_id> <PDBx:beg_label_comp_id>PRO</PDBx:beg_label_comp_id> <PDBx:beg_label_seq_id>31</PDBx:beg_label_seq_id> <PDBx:end_label_alt_id xsi:nil="true" /> <PDBx:end_label_asym_id>B</PDBx:end_label_asym_id> <PDBx:end_label_comp_id>GLY</PDBx:end_label_comp_id> <PDBx:end_label_seq_id>59</PDBx:end_label_seq_id> </PDBx:struct_ncs_dom_lim> <PDBx:struct_ncs_dom_lim dom_id="d1" pdbx_component_id="3" pdbx_ens_id="1"> <PDBx:beg_label_alt_id xsi:nil="true" /> <PDBx:beg_label_asym_id>C</PDBx:beg_label_asym_id> <PDBx:beg_label_comp_id>PRO</PDBx:beg_label_comp_id> <PDBx:beg_label_seq_id>61</PDBx:beg_label_seq_id> <PDBx:end_label_alt_id xsi:nil="true" /> <PDBx:end_label_asym_id>B</PDBx:end_label_asym_id> <PDBx:end_label_comp_id>GLY</PDBx:end_label_comp_id> <PDBx:end_label_seq_id>89</PDBx:end_label_seq_id> </PDBx:struct_ncs_dom_lim> <PDBx:struct_ncs_dom_lim dom_id="d2" pdbx_component_id="1" pdbx_ens_id="1"> <PDBx:beg_label_alt_id xsi:nil="true" /> <PDBx:beg_label_asym_id>D</PDBx:beg_label_asym_id> <PDBx:beg_label_comp_id>PRO</PDBx:beg_label_comp_id> <PDBx:beg_label_seq_id>91</PDBx:beg_label_seq_id> <PDBx:end_label_alt_id xsi:nil="true" /> <PDBx:end_label_asym_id>D</PDBx:end_label_asym_id> <PDBx:end_label_comp_id>GLY</PDBx:end_label_comp_id> <PDBx:end_label_seq_id>119</PDBx:end_label_seq_id> </PDBx:struct_ncs_dom_lim> <PDBx:struct_ncs_dom_lim dom_id="d2" pdbx_component_id="2" pdbx_ens_id="1"> <PDBx:beg_label_alt_id xsi:nil="true" /> <PDBx:beg_label_asym_id>E</PDBx:beg_label_asym_id> <PDBx:beg_label_comp_id>PRO</PDBx:beg_label_comp_id> <PDBx:beg_label_seq_id>121</PDBx:beg_label_seq_id> <PDBx:end_label_alt_id xsi:nil="true" /> <PDBx:end_label_asym_id>E</PDBx:end_label_asym_id> <PDBx:end_label_comp_id>GLY</PDBx:end_label_comp_id> <PDBx:end_label_seq_id>149</PDBx:end_label_seq_id> </PDBx:struct_ncs_dom_lim> <PDBx:struct_ncs_dom_lim dom_id="d2" pdbx_component_id="3" pdbx_ens_id="1"> <PDBx:beg_label_alt_id xsi:nil="true" /> <PDBx:beg_label_asym_id>F</PDBx:beg_label_asym_id> <PDBx:beg_label_comp_id>PRO</PDBx:beg_label_comp_id> <PDBx:beg_label_seq_id>151</PDBx:beg_label_seq_id> <PDBx:end_label_alt_id xsi:nil="true" /> <PDBx:end_label_asym_id>F</PDBx:end_label_asym_id> <PDBx:end_label_comp_id>GLY</PDBx:end_label_comp_id> <PDBx:end_label_seq_id>179</PDBx:end_label_seq_id> </PDBx:struct_ncs_dom_lim> </PDBx:struct_ncs_dom_limCategory> |
<xsd:complexType name="struct_ncs_dom_limType"> <xsd:annotation> <xsd:documentation xml:lang="en">Data items in the STRUCT_NCS_DOM_LIM category identify the start and end points of polypeptide chain segments that form all or part of a domain in an ensemble of domains related by noncrystallographic symmetry. Example 1 - based on laboratory records for the collagen-like peptide, HYP-. <PDBx:struct_ncs_dom_limCategory> <PDBx:struct_ncs_dom_lim dom_id="d1" pdbx_component_id="1" pdbx_ens_id="1"> <PDBx:beg_label_alt_id xsi:nil="true" /> <PDBx:beg_label_asym_id>A</PDBx:beg_label_asym_id> <PDBx:beg_label_comp_id>PRO</PDBx:beg_label_comp_id> <PDBx:beg_label_seq_id>1</PDBx:beg_label_seq_id> <PDBx:end_label_alt_id xsi:nil="true" /> <PDBx:end_label_asym_id>A</PDBx:end_label_asym_id> <PDBx:end_label_comp_id>GLY</PDBx:end_label_comp_id> <PDBx:end_label_seq_id>29</PDBx:end_label_seq_id> </PDBx:struct_ncs_dom_lim> <PDBx:struct_ncs_dom_lim dom_id="d1" pdbx_component_id="2" pdbx_ens_id="1"> <PDBx:beg_label_alt_id xsi:nil="true" /> <PDBx:beg_label_asym_id>B</PDBx:beg_label_asym_id> <PDBx:beg_label_comp_id>PRO</PDBx:beg_label_comp_id> <PDBx:beg_label_seq_id>31</PDBx:beg_label_seq_id> <PDBx:end_label_alt_id xsi:nil="true" /> <PDBx:end_label_asym_id>B</PDBx:end_label_asym_id> <PDBx:end_label_comp_id>GLY</PDBx:end_label_comp_id> <PDBx:end_label_seq_id>59</PDBx:end_label_seq_id> </PDBx:struct_ncs_dom_lim> <PDBx:struct_ncs_dom_lim dom_id="d1" pdbx_component_id="3" pdbx_ens_id="1"> <PDBx:beg_label_alt_id xsi:nil="true" /> <PDBx:beg_label_asym_id>C</PDBx:beg_label_asym_id> <PDBx:beg_label_comp_id>PRO</PDBx:beg_label_comp_id> <PDBx:beg_label_seq_id>61</PDBx:beg_label_seq_id> <PDBx:end_label_alt_id xsi:nil="true" /> <PDBx:end_label_asym_id>B</PDBx:end_label_asym_id> <PDBx:end_label_comp_id>GLY</PDBx:end_label_comp_id> <PDBx:end_label_seq_id>89</PDBx:end_label_seq_id> </PDBx:struct_ncs_dom_lim> <PDBx:struct_ncs_dom_lim dom_id="d2" pdbx_component_id="1" pdbx_ens_id="1"> <PDBx:beg_label_alt_id xsi:nil="true" /> <PDBx:beg_label_asym_id>D</PDBx:beg_label_asym_id> <PDBx:beg_label_comp_id>PRO</PDBx:beg_label_comp_id> <PDBx:beg_label_seq_id>91</PDBx:beg_label_seq_id> <PDBx:end_label_alt_id xsi:nil="true" /> <PDBx:end_label_asym_id>D</PDBx:end_label_asym_id> <PDBx:end_label_comp_id>GLY</PDBx:end_label_comp_id> <PDBx:end_label_seq_id>119</PDBx:end_label_seq_id> </PDBx:struct_ncs_dom_lim> <PDBx:struct_ncs_dom_lim dom_id="d2" pdbx_component_id="2" pdbx_ens_id="1"> <PDBx:beg_label_alt_id xsi:nil="true" /> <PDBx:beg_label_asym_id>E</PDBx:beg_label_asym_id> <PDBx:beg_label_comp_id>PRO</PDBx:beg_label_comp_id> <PDBx:beg_label_seq_id>121</PDBx:beg_label_seq_id> <PDBx:end_label_alt_id xsi:nil="true" /> <PDBx:end_label_asym_id>E</PDBx:end_label_asym_id> <PDBx:end_label_comp_id>GLY</PDBx:end_label_comp_id> <PDBx:end_label_seq_id>149</PDBx:end_label_seq_id> </PDBx:struct_ncs_dom_lim> <PDBx:struct_ncs_dom_lim dom_id="d2" pdbx_component_id="3" pdbx_ens_id="1"> <PDBx:beg_label_alt_id xsi:nil="true" /> <PDBx:beg_label_asym_id>F</PDBx:beg_label_asym_id> <PDBx:beg_label_comp_id>PRO</PDBx:beg_label_comp_id> <PDBx:beg_label_seq_id>151</PDBx:beg_label_seq_id> <PDBx:end_label_alt_id xsi:nil="true" /> <PDBx:end_label_asym_id>F</PDBx:end_label_asym_id> <PDBx:end_label_comp_id>GLY</PDBx:end_label_comp_id> <PDBx:end_label_seq_id>179</PDBx:end_label_seq_id> </PDBx:struct_ncs_dom_lim> </PDBx:struct_ncs_dom_limCategory></xsd:documentation> </xsd:annotation> <xsd:sequence> <xsd:element name="struct_ncs_dom_lim" minOccurs="0" maxOccurs="unbounded"> <xsd:complexType> <xsd:all> <xsd:element name="beg_auth_asym_id" minOccurs="0" maxOccurs="1" nillable="true" type="xsd:string"> <xsd:annotation> <xsd:documentation xml:lang="en">A component of the identifier for the monomer at which this segment of the domain begins.</xsd:documentation> </xsd:annotation> </xsd:element> <xsd:element name="beg_auth_comp_id" minOccurs="0" maxOccurs="1" nillable="true" type="xsd:string"> <xsd:annotation> <xsd:documentation xml:lang="en">A component of the identifier for the monomer at which this segment of the domain begins.</xsd:documentation> </xsd:annotation> </xsd:element> <xsd:element name="beg_auth_seq_id" minOccurs="0" maxOccurs="1" nillable="true" type="xsd:string"> <xsd:annotation> <xsd:documentation xml:lang="en">A component of the identifier for the monomer at which this segment of the domain begins. This data item is a pointer to attribute auth_seq_id in category atom_site in the ATOM_SITE category.</xsd:documentation> </xsd:annotation> </xsd:element> <xsd:element name="beg_label_alt_id" minOccurs="0" maxOccurs="1" nillable="true" type="xsd:string"> <xsd:annotation> <xsd:documentation xml:lang="en">A component of the identifier for the monomer at which this segment of the domain begins.</xsd:documentation> </xsd:annotation> </xsd:element> <xsd:element name="beg_label_asym_id" minOccurs="0" maxOccurs="1" nillable="true" type="xsd:string"> <xsd:annotation> <xsd:documentation xml:lang="en">A component of the identifier for the monomer at which this segment of the domain begins. This data item is a pointer to attribute id in category struct_asym in the STRUCT_ASYM category.</xsd:documentation> </xsd:annotation> </xsd:element> <xsd:element name="beg_label_comp_id" minOccurs="0" maxOccurs="1" nillable="true" type="xsd:string"> <xsd:annotation> <xsd:documentation xml:lang="en">A component of the identifier for the monomer at which this segment of the domain begins.</xsd:documentation> </xsd:annotation> </xsd:element> <xsd:element name="beg_label_seq_id" minOccurs="0" maxOccurs="1" nillable="true" type="xsd:integer"> <xsd:annotation> <xsd:documentation xml:lang="en">A component of the identifier for the monomer at which this segment of the domain begins.</xsd:documentation> </xsd:annotation> </xsd:element> <xsd:element name="end_auth_asym_id" minOccurs="0" maxOccurs="1" nillable="true" type="xsd:string"> <xsd:annotation> <xsd:documentation xml:lang="en">A component of the identifier for the monomer at which this segment of the domain ends.</xsd:documentation> </xsd:annotation> </xsd:element> <xsd:element name="end_auth_comp_id" minOccurs="0" maxOccurs="1" nillable="true" type="xsd:string"> <xsd:annotation> <xsd:documentation xml:lang="en">A component of the identifier for the monomer at which this segment of the domain ends.</xsd:documentation> </xsd:annotation> </xsd:element> <xsd:element name="end_auth_seq_id" minOccurs="0" maxOccurs="1" nillable="true" type="xsd:string"> <xsd:annotation> <xsd:documentation xml:lang="en">A component of the identifier for the monomer at which this segment of the domain ends.</xsd:documentation> </xsd:annotation> </xsd:element> <xsd:element name="end_label_alt_id" minOccurs="0" maxOccurs="1" nillable="true" type="xsd:string"> <xsd:annotation> <xsd:documentation xml:lang="en">A component of the identifier for the monomer at which this segment of the domain ends.</xsd:documentation> </xsd:annotation> </xsd:element> <xsd:element name="end_label_asym_id" minOccurs="0" maxOccurs="1" nillable="true" type="xsd:string"> <xsd:annotation> <xsd:documentation xml:lang="en">A component of the identifier for the monomer at which this segment of the domain ends. This data item is a pointer to attribute id in category struct_asym in the STRUCT_ASYM category.</xsd:documentation> </xsd:annotation> </xsd:element> <xsd:element name="end_label_comp_id" minOccurs="0" maxOccurs="1" nillable="true" type="xsd:string"> <xsd:annotation> <xsd:documentation xml:lang="en">A component of the identifier for the monomer at which this segment of the domain ends.</xsd:documentation> </xsd:annotation> </xsd:element> <xsd:element name="end_label_seq_id" minOccurs="0" maxOccurs="1" nillable="true" type="xsd:integer"> <xsd:annotation> <xsd:documentation xml:lang="en">A component of the identifier for the monomer at which this segment of the domain ends.</xsd:documentation> </xsd:annotation> </xsd:element> <xsd:element name="pdbx_refine_code" minOccurs="0" maxOccurs="1" nillable="true" type="xsd:decimal"> <xsd:annotation> <xsd:documentation xml:lang="en">record the refinement code number (from CCP4.)</xsd:documentation> </xsd:annotation> </xsd:element> <xsd:element name="selection_details" minOccurs="0" maxOccurs="1" nillable="true" type="xsd:string"> <xsd:annotation> <xsd:documentation xml:lang="en">A text description of the selection of residues that correspond to this domain.</xsd:documentation> </xsd:annotation> </xsd:element> </xsd:all> <xsd:attribute name="dom_id" use="required" type="xsd:string"> <xsd:annotation> <xsd:documentation xml:lang="en">This data item is a pointer to attribute id in category struct_ncs_dom in the STRUCT_NCS_DOM category.</xsd:documentation> </xsd:annotation> </xsd:attribute> <xsd:attribute name="pdbx_component_id" use="required" type="xsd:integer"> <xsd:annotation> <xsd:documentation xml:lang="en">Record number of the NCS domain limit assignment.</xsd:documentation> </xsd:annotation> </xsd:attribute> <xsd:attribute name="pdbx_ens_id" use="required" type="xsd:string"> <xsd:annotation> <xsd:documentation xml:lang="en">This is a unique identifier for a collection NCS related domains. This references item '_struct_ncs_dom.pdbx_ens_id'.</xsd:documentation> </xsd:annotation> </xsd:attribute> </xsd:complexType> </xsd:element> </xsd:sequence> </xsd:complexType> |