PDBx:struct_mon_prot_cisType 

Data items in the STRUCT_MON_PROT_CIS category identify
monomers that have been found to have the peptide bond in the cis
conformation. The criterion used to select residues to be
designated as containing cis peptide bonds is given in
attribute prot_cis in category struct_mon_details. 

    Example 1 - based on PDB structure 1ACY of Ghiara, Stura, Stanfield,
                Profy & Wilson [Science (1994),  264,  82-85].
<PDBx:struct_mon_prot_cisCategory>
   <PDBx:struct_mon_prot_cis pdbx_id="1">
      <PDBx:label_alt_id xsi:nil="true" />
      <PDBx:label_asym_id>L</PDBx:label_asym_id>
      <PDBx:label_comp_id>PRO</PDBx:label_comp_id>
      <PDBx:label_seq_id>8</PDBx:label_seq_id>
      <PDBx:pdbx_PDB_model_num>1</PDBx:pdbx_PDB_model_num>
   </PDBx:struct_mon_prot_cis>
   <PDBx:struct_mon_prot_cis pdbx_id="2">
      <PDBx:label_alt_id xsi:nil="true" />
      <PDBx:label_asym_id>L</PDBx:label_asym_id>
      <PDBx:label_comp_id>PRO</PDBx:label_comp_id>
      <PDBx:label_seq_id>77</PDBx:label_seq_id>
      <PDBx:pdbx_PDB_model_num>1</PDBx:pdbx_PDB_model_num>
   </PDBx:struct_mon_prot_cis>
   <PDBx:struct_mon_prot_cis pdbx_id="3">
      <PDBx:label_alt_id xsi:nil="true" />
      <PDBx:label_asym_id>L</PDBx:label_asym_id>
      <PDBx:label_comp_id>PRO</PDBx:label_comp_id>
      <PDBx:label_seq_id>95</PDBx:label_seq_id>
      <PDBx:pdbx_PDB_model_num>1</PDBx:pdbx_PDB_model_num>
   </PDBx:struct_mon_prot_cis>
   <PDBx:struct_mon_prot_cis pdbx_id="4">
      <PDBx:label_alt_id xsi:nil="true" />
      <PDBx:label_asym_id>L</PDBx:label_asym_id>
      <PDBx:label_comp_id>PRO</PDBx:label_comp_id>
      <PDBx:label_seq_id>141</PDBx:label_seq_id>
      <PDBx:pdbx_PDB_model_num>1</PDBx:pdbx_PDB_model_num>
   </PDBx:struct_mon_prot_cis>
</PDBx:struct_mon_prot_cisCategory>

Complex Type Information

Model

PDBx:struct_mon_prot_cis*
Children: PDBx:struct_mon_prot_cis

Used By

Element PDBx:datablockType/PDBx:struct_mon_prot_cisCategory

Source 

<xsd:complexType name="struct_mon_prot_cisType">
  <xsd:annotation>
    <xsd:documentation xml:lang="en">Data items in the STRUCT_MON_PROT_CIS category identify monomers that have been found to have the peptide bond in the cis conformation. The criterion used to select residues to be designated as containing cis peptide bonds is given in attribute prot_cis in category struct_mon_details. Example 1 - based on PDB structure 1ACY of Ghiara, Stura, Stanfield, Profy & Wilson [Science (1994), 264, 82-85]. <PDBx:struct_mon_prot_cisCategory> <PDBx:struct_mon_prot_cis pdbx_id="1"> <PDBx:label_alt_id xsi:nil="true" /> <PDBx:label_asym_id>L</PDBx:label_asym_id> <PDBx:label_comp_id>PRO</PDBx:label_comp_id> <PDBx:label_seq_id>8</PDBx:label_seq_id> <PDBx:pdbx_PDB_model_num>1</PDBx:pdbx_PDB_model_num> </PDBx:struct_mon_prot_cis> <PDBx:struct_mon_prot_cis pdbx_id="2"> <PDBx:label_alt_id xsi:nil="true" /> <PDBx:label_asym_id>L</PDBx:label_asym_id> <PDBx:label_comp_id>PRO</PDBx:label_comp_id> <PDBx:label_seq_id>77</PDBx:label_seq_id> <PDBx:pdbx_PDB_model_num>1</PDBx:pdbx_PDB_model_num> </PDBx:struct_mon_prot_cis> <PDBx:struct_mon_prot_cis pdbx_id="3"> <PDBx:label_alt_id xsi:nil="true" /> <PDBx:label_asym_id>L</PDBx:label_asym_id> <PDBx:label_comp_id>PRO</PDBx:label_comp_id> <PDBx:label_seq_id>95</PDBx:label_seq_id> <PDBx:pdbx_PDB_model_num>1</PDBx:pdbx_PDB_model_num> </PDBx:struct_mon_prot_cis> <PDBx:struct_mon_prot_cis pdbx_id="4"> <PDBx:label_alt_id xsi:nil="true" /> <PDBx:label_asym_id>L</PDBx:label_asym_id> <PDBx:label_comp_id>PRO</PDBx:label_comp_id> <PDBx:label_seq_id>141</PDBx:label_seq_id> <PDBx:pdbx_PDB_model_num>1</PDBx:pdbx_PDB_model_num> </PDBx:struct_mon_prot_cis> </PDBx:struct_mon_prot_cisCategory></xsd:documentation>
  </xsd:annotation>
  <xsd:sequence>
    <xsd:element name="struct_mon_prot_cis" minOccurs="0" maxOccurs="unbounded">
      <xsd:complexType>
        <xsd:all>
          <xsd:element name="auth_asym_id" minOccurs="0" maxOccurs="1" nillable="true" type="xsd:string">
            <xsd:annotation>
              <xsd:documentation xml:lang="en">A component of the identifier for the monomer. This data item is a pointer to attribute auth_asym_id in category atom_site in the ATOM_SITE category.</xsd:documentation>
            </xsd:annotation>
          </xsd:element>
          <xsd:element name="auth_comp_id" minOccurs="0" maxOccurs="1" nillable="true" type="xsd:string">
            <xsd:annotation>
              <xsd:documentation xml:lang="en">A component of the identifier for the monomer. This data item is a pointer to attribute auth_comp_id in category atom_site in the ATOM_SITE category.</xsd:documentation>
            </xsd:annotation>
          </xsd:element>
          <xsd:element name="auth_seq_id" minOccurs="0" maxOccurs="1" nillable="true" type="xsd:string">
            <xsd:annotation>
              <xsd:documentation xml:lang="en">A component of the identifier for the monomer. This data item is a pointer to attribute auth_seq_id in category atom_site in the ATOM_SITE category.</xsd:documentation>
            </xsd:annotation>
          </xsd:element>
          <xsd:element name="label_alt_id" minOccurs="1" maxOccurs="1" nillable="true" type="xsd:string">
            <xsd:annotation>
              <xsd:documentation xml:lang="en">A component of the identifier for the monomer. This data item is a pointer to attribute id in category atom_sites_alt in the ATOM_SITES_ALT category.</xsd:documentation>
            </xsd:annotation>
          </xsd:element>
          <xsd:element name="label_asym_id" minOccurs="1" maxOccurs="1" type="xsd:string">
            <xsd:annotation>
              <xsd:documentation xml:lang="en">A component of the identifier for the monomer. This data item is a pointer to attribute label_asym_id in category atom_site in the ATOM_SITE category.</xsd:documentation>
            </xsd:annotation>
          </xsd:element>
          <xsd:element name="label_comp_id" minOccurs="1" maxOccurs="1" type="xsd:string">
            <xsd:annotation>
              <xsd:documentation xml:lang="en">A component of the identifier for the monomer. This data item is a pointer to attribute label_comp_id in category atom_site in the ATOM_SITE category.</xsd:documentation>
            </xsd:annotation>
          </xsd:element>
          <xsd:element name="label_seq_id" minOccurs="1" maxOccurs="1" type="xsd:integer">
            <xsd:annotation>
              <xsd:documentation xml:lang="en">A component of the identifier for the monomer. This data item is a pointer to attribute label_seq_id in category atom_site in the ATOM_SITE category.</xsd:documentation>
            </xsd:annotation>
          </xsd:element>
          <xsd:element name="pdbx_PDB_ins_code" minOccurs="0" maxOccurs="1" nillable="true" type="xsd:string">
            <xsd:annotation>
              <xsd:documentation xml:lang="en">Pointer to attribute pdbx_PDB_ins_code in category atom_site</xsd:documentation>
            </xsd:annotation>
          </xsd:element>
          <xsd:element name="pdbx_PDB_ins_code_2" minOccurs="0" maxOccurs="1" nillable="true" type="xsd:string">
            <xsd:annotation>
              <xsd:documentation xml:lang="en">Pointer to attribute pdbx_PDB_ins_code in category atom_site</xsd:documentation>
            </xsd:annotation>
          </xsd:element>
          <xsd:element name="pdbx_PDB_model_num" minOccurs="1" maxOccurs="1" type="xsd:integer">
            <xsd:annotation>
              <xsd:documentation xml:lang="en">Pointer to attribute pdbx_PDB_model_num in category atom_site</xsd:documentation>
            </xsd:annotation>
          </xsd:element>
          <xsd:element name="pdbx_auth_asym_id_2" minOccurs="0" maxOccurs="1" nillable="true" type="xsd:string">
            <xsd:annotation>
              <xsd:documentation xml:lang="en">Pointer to attribute auth_asym_id in category atom_site.</xsd:documentation>
            </xsd:annotation>
          </xsd:element>
          <xsd:element name="pdbx_auth_comp_id_2" minOccurs="0" maxOccurs="1" nillable="true" type="xsd:string">
            <xsd:annotation>
              <xsd:documentation xml:lang="en">Pointer to attribute auth_comp_id in category atom_site.</xsd:documentation>
            </xsd:annotation>
          </xsd:element>
          <xsd:element name="pdbx_auth_seq_id_2" minOccurs="0" maxOccurs="1" nillable="true" type="xsd:string">
            <xsd:annotation>
              <xsd:documentation xml:lang="en">Pointer to attribute auth_seq_id in category atom_site</xsd:documentation>
            </xsd:annotation>
          </xsd:element>
          <xsd:element name="pdbx_label_asym_id_2" minOccurs="0" maxOccurs="1" nillable="true" type="xsd:string">
            <xsd:annotation>
              <xsd:documentation xml:lang="en">Pointer to attribute label_asym_id in category atom_site.</xsd:documentation>
            </xsd:annotation>
          </xsd:element>
          <xsd:element name="pdbx_label_comp_id_2" minOccurs="0" maxOccurs="1" nillable="true" type="xsd:string">
            <xsd:annotation>
              <xsd:documentation xml:lang="en">Pointer to attribute label_comp_id in category atom_site.</xsd:documentation>
            </xsd:annotation>
          </xsd:element>
          <xsd:element name="pdbx_label_seq_id_2" minOccurs="0" maxOccurs="1" nillable="true" type="xsd:integer">
            <xsd:annotation>
              <xsd:documentation xml:lang="en">Pointer to attribute label_seq_id in category atom_site</xsd:documentation>
            </xsd:annotation>
          </xsd:element>
          <xsd:element name="pdbx_omega_angle" minOccurs="0" maxOccurs="1" nillable="true" type="xsd:string">
            <xsd:annotation>
              <xsd:documentation xml:lang="en">omega torsion angle</xsd:documentation>
            </xsd:annotation>
          </xsd:element>
        </xsd:all>
        <xsd:attribute name="pdbx_id" use="required" type="xsd:string">
          <xsd:annotation>
            <xsd:documentation xml:lang="en">ordinal index</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
      </xsd:complexType>
    </xsd:element>
  </xsd:sequence>
</xsd:complexType>