PDBx:chem_link_angleType

Data items in the CHEM_LINK_ANGLE category record details
about angles in a link between chemical components.

    Example 1 - Engh & Huber parameters [Acta Cryst. (1991), A47,
                392-400] as interpreted by J. P. Priestle (1995). Consistent
                Stereochemical Dictionaries for Refinement and Model
                Building. CCP4 Daresbury Study Weekend,
                DL-CONF-95-001, ISSN 1358-6254. Warrington: Daresbury
                Laboratory.
<PDBx:chem_link_angleCategory>
   <PDBx:chem_link_angle atom_id_1="N" atom_id_2="CA" atom_id_3="C" link_id="PEPTIDE">
      <PDBx:atom_1_comp_id>1</PDBx:atom_1_comp_id>
      <PDBx:atom_2_comp_id>1</PDBx:atom_2_comp_id>
      <PDBx:atom_3_comp_id>1</PDBx:atom_3_comp_id>
      <PDBx:value_angle>111.2</PDBx:value_angle>
      <PDBx:value_angle_esd>2.8</PDBx:value_angle_esd>
   </PDBx:chem_link_angle>
   <PDBx:chem_link_angle atom_id_1="CA" atom_id_2="C" atom_id_3="O" link_id="PEPTIDE">
      <PDBx:atom_1_comp_id>1</PDBx:atom_1_comp_id>
      <PDBx:atom_2_comp_id>1</PDBx:atom_2_comp_id>
      <PDBx:atom_3_comp_id>1</PDBx:atom_3_comp_id>
      <PDBx:value_angle>120.8</PDBx:value_angle>
      <PDBx:value_angle_esd>1.7</PDBx:value_angle_esd>
   </PDBx:chem_link_angle>
   <PDBx:chem_link_angle atom_id_1="CA" atom_id_2="C" atom_id_3="N" link_id="PEPTIDE">
      <PDBx:atom_1_comp_id>1</PDBx:atom_1_comp_id>
      <PDBx:atom_2_comp_id>1</PDBx:atom_2_comp_id>
      <PDBx:atom_3_comp_id>2</PDBx:atom_3_comp_id>
      <PDBx:value_angle>116.2</PDBx:value_angle>
      <PDBx:value_angle_esd>2.0</PDBx:value_angle_esd>
   </PDBx:chem_link_angle>
   <PDBx:chem_link_angle atom_id_1="O" atom_id_2="C" atom_id_3="N" link_id="PEPTIDE">
      <PDBx:atom_1_comp_id>1</PDBx:atom_1_comp_id>
      <PDBx:atom_2_comp_id>1</PDBx:atom_2_comp_id>
      <PDBx:atom_3_comp_id>2</PDBx:atom_3_comp_id>
      <PDBx:value_angle>123.0</PDBx:value_angle>
      <PDBx:value_angle_esd>1.6</PDBx:value_angle_esd>
   </PDBx:chem_link_angle>
   <PDBx:chem_link_angle atom_id_1="C" atom_id_2="N" atom_id_3="CA" link_id="PEPTIDE">
      <PDBx:atom_1_comp_id>1</PDBx:atom_1_comp_id>
      <PDBx:atom_2_comp_id>2</PDBx:atom_2_comp_id>
      <PDBx:atom_3_comp_id>2</PDBx:atom_3_comp_id>
      <PDBx:value_angle>121.7</PDBx:value_angle>
      <PDBx:value_angle_esd>1.8</PDBx:value_angle_esd>
   </PDBx:chem_link_angle>
</PDBx:chem_link_angleCategory>

Complex Type Information

Model

Used By

Source

<xsd:complexType name="chem_link_angleType">
  <xsd:annotation>
    <xsd:documentation xml:lang="en">Data items in the CHEM_LINK_ANGLE category record details about angles in a link between chemical components. Example 1 - Engh & Huber parameters [Acta Cryst. (1991), A47, 392-400] as interpreted by J. P. Priestle (1995). Consistent Stereochemical Dictionaries for Refinement and Model Building. CCP4 Daresbury Study Weekend, DL-CONF-95-001, ISSN 1358-6254. Warrington: Daresbury Laboratory. <PDBx:chem_link_angleCategory> <PDBx:chem_link_angle atom_id_1="N" atom_id_2="CA" atom_id_3="C" link_id="PEPTIDE"> <PDBx:atom_1_comp_id>1</PDBx:atom_1_comp_id> <PDBx:atom_2_comp_id>1</PDBx:atom_2_comp_id> <PDBx:atom_3_comp_id>1</PDBx:atom_3_comp_id> <PDBx:value_angle>111.2</PDBx:value_angle> <PDBx:value_angle_esd>2.8</PDBx:value_angle_esd> </PDBx:chem_link_angle> <PDBx:chem_link_angle atom_id_1="CA" atom_id_2="C" atom_id_3="O" link_id="PEPTIDE"> <PDBx:atom_1_comp_id>1</PDBx:atom_1_comp_id> <PDBx:atom_2_comp_id>1</PDBx:atom_2_comp_id> <PDBx:atom_3_comp_id>1</PDBx:atom_3_comp_id> <PDBx:value_angle>120.8</PDBx:value_angle> <PDBx:value_angle_esd>1.7</PDBx:value_angle_esd> </PDBx:chem_link_angle> <PDBx:chem_link_angle atom_id_1="CA" atom_id_2="C" atom_id_3="N" link_id="PEPTIDE"> <PDBx:atom_1_comp_id>1</PDBx:atom_1_comp_id> <PDBx:atom_2_comp_id>1</PDBx:atom_2_comp_id> <PDBx:atom_3_comp_id>2</PDBx:atom_3_comp_id> <PDBx:value_angle>116.2</PDBx:value_angle> <PDBx:value_angle_esd>2.0</PDBx:value_angle_esd> </PDBx:chem_link_angle> <PDBx:chem_link_angle atom_id_1="O" atom_id_2="C" atom_id_3="N" link_id="PEPTIDE"> <PDBx:atom_1_comp_id>1</PDBx:atom_1_comp_id> <PDBx:atom_2_comp_id>1</PDBx:atom_2_comp_id> <PDBx:atom_3_comp_id>2</PDBx:atom_3_comp_id> <PDBx:value_angle>123.0</PDBx:value_angle> <PDBx:value_angle_esd>1.6</PDBx:value_angle_esd> </PDBx:chem_link_angle> <PDBx:chem_link_angle atom_id_1="C" atom_id_2="N" atom_id_3="CA" link_id="PEPTIDE"> <PDBx:atom_1_comp_id>1</PDBx:atom_1_comp_id> <PDBx:atom_2_comp_id>2</PDBx:atom_2_comp_id> <PDBx:atom_3_comp_id>2</PDBx:atom_3_comp_id> <PDBx:value_angle>121.7</PDBx:value_angle> <PDBx:value_angle_esd>1.8</PDBx:value_angle_esd> </PDBx:chem_link_angle> </PDBx:chem_link_angleCategory></xsd:documentation>
  </xsd:annotation>
  <xsd:sequence>
    <xsd:element name="chem_link_angle" minOccurs="0" maxOccurs="unbounded">
      <xsd:complexType>
        <xsd:all>
          <xsd:element name="atom_1_comp_id" minOccurs="0" maxOccurs="1" nillable="true">
            <xsd:annotation>
              <xsd:documentation xml:lang="en">This data item indicates whether atom 1 is found in the first or the second of the two components connected by the link.</xsd:documentation>
            </xsd:annotation>
            <xsd:simpleType>
              <xsd:restriction base="xsd:string">
                <xsd:enumeration value="1"/>
                <xsd:enumeration value="2"/>
              </xsd:restriction>
            </xsd:simpleType>
          </xsd:element>
          <xsd:element name="atom_2_comp_id" minOccurs="0" maxOccurs="1" nillable="true">
            <xsd:annotation>
              <xsd:documentation xml:lang="en">This data item indicates whether atom 2 is found in the first or the second of the two components connected by the link.</xsd:documentation>
            </xsd:annotation>
            <xsd:simpleType>
              <xsd:restriction base="xsd:string">
                <xsd:enumeration value="1"/>
                <xsd:enumeration value="2"/>
              </xsd:restriction>
            </xsd:simpleType>
          </xsd:element>
          <xsd:element name="atom_3_comp_id" minOccurs="0" maxOccurs="1" nillable="true">
            <xsd:annotation>
              <xsd:documentation xml:lang="en">This data item indicates whether atom 3 is found in the first or the second of the two components connected by the link.</xsd:documentation>
            </xsd:annotation>
            <xsd:simpleType>
              <xsd:restriction base="xsd:string">
                <xsd:enumeration value="1"/>
                <xsd:enumeration value="2"/>
              </xsd:restriction>
            </xsd:simpleType>
          </xsd:element>
          <xsd:element name="value_angle" minOccurs="0" maxOccurs="1" nillable="true">
            <xsd:annotation>
              <xsd:documentation xml:lang="en">The value that should be taken as the target value for the angle associated with the specified atoms, expressed in degrees.</xsd:documentation>
            </xsd:annotation>
            <xsd:simpleType>
              <xsd:restriction base="xsd:decimal">
                <xsd:minInclusive value="0.0"/>
                <xsd:maxInclusive value="180.0"/>
              </xsd:restriction>
            </xsd:simpleType>
          </xsd:element>
          <xsd:element name="value_angle_esd" minOccurs="0" maxOccurs="1" nillable="true">
            <xsd:annotation>
              <xsd:documentation xml:lang="en">The standard uncertainty (estimated standard deviation) of attribute value_angle in category chem_link_angle.</xsd:documentation>
            </xsd:annotation>
            <xsd:simpleType>
              <xsd:restriction base="xsd:decimal">
                <xsd:minInclusive value="0.0"/>
                <xsd:maxInclusive value="180.0"/>
              </xsd:restriction>
            </xsd:simpleType>
          </xsd:element>
          <xsd:element name="value_dist" minOccurs="0" maxOccurs="1" nillable="true">
            <xsd:annotation>
              <xsd:documentation xml:lang="en">The value that should be taken as the target value for the angle associated with the specified atoms, expressed as the distance between the atoms specified by attribute atom_id_1 in category chem_comp_angle and attribute atom_id_3 in category chem_comp_angle.</xsd:documentation>
            </xsd:annotation>
            <xsd:simpleType>
              <xsd:restriction base="xsd:decimal">
                <xsd:minInclusive value="0.0"/>
              </xsd:restriction>
            </xsd:simpleType>
          </xsd:element>
          <xsd:element name="value_dist_esd" minOccurs="0" maxOccurs="1" nillable="true">
            <xsd:annotation>
              <xsd:documentation xml:lang="en">The standard uncertainty (estimated standard deviation) of attribute value_dist in category chem_comp_angle.</xsd:documentation>
            </xsd:annotation>
            <xsd:simpleType>
              <xsd:restriction base="xsd:decimal">
                <xsd:minInclusive value="0.0"/>
              </xsd:restriction>
            </xsd:simpleType>
          </xsd:element>
        </xsd:all>
        <xsd:attribute name="atom_id_1" use="required" type="xsd:string">
          <xsd:annotation>
            <xsd:documentation xml:lang="en">The ID of the first of the three atoms that define the angle. An atom with this ID must exist in the component of the type specified by attribute type_comp_1 in category chem_comp_link (or attribute type_comp_2 in category chem_comp_link, where the appropriate data item is indicated by the value of attribute atom_1_comp_id) in category chem_comp_angle.</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
        <xsd:attribute name="atom_id_2" use="required" type="xsd:string">
          <xsd:annotation>
            <xsd:documentation xml:lang="en">The ID of the second of the three atoms that define the angle. The second atom is taken to be the apex of the angle. An atom with this ID must exist in the component of the type specified by attribute type_comp_1 in category chem_comp_link (or attribute type_comp_2 in category chem_comp_link, where the appropriate data item is indicated by the value of attribute atom_2_comp_id) in category chem_comp_angle.</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
        <xsd:attribute name="atom_id_3" use="required" type="xsd:string">
          <xsd:annotation>
            <xsd:documentation xml:lang="en">The ID of the third of the three atoms that define the angle. An atom with this ID must exist in the component of the type specified by attribute type_comp_1 in category chem_comp_link (or attribute type_comp_2 in category chem_comp_link, where the appropriate data item is indicated by the value of attribute atom_3_comp_id) in category chem_comp_angle.</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
        <xsd:attribute name="link_id" use="required" type="xsd:string">
          <xsd:annotation>
            <xsd:documentation xml:lang="en">This data item is a pointer to attribute id in category chem_link in the CHEM_LINK category.</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
      </xsd:complexType>
    </xsd:element>
  </xsd:sequence>
</xsd:complexType>